The default cache directory for the file-based rate limiter was
src/cache/rate_limit/, placing transient JSON files inside the source tree.
This meant:
- The directory was deployed via rsync on every deploy (wasted I/O)
- .gitignore had to track a src/-internal path
- Developers running tests could leave stale cache state in the source tree
Changes:
- src/RateLimit.php: default $cacheDir changed from __DIR__.'/cache/rate_limit'
to dirname(__DIR__).'/storage/cache/rate_limit'; dirname(__DIR__) resolves to
the project root regardless of how the file is loaded (with or without bootstrap)
- .gitignore: replaced 'src/cache/rate_limit/' with 'storage/cache/' (broader,
covers any future cache subdirs under storage/)
- storage/cache/.gitkeep: added so the directory is tracked in VCS and created
on fresh clones/deploys, but its contents are ignored
- justfile: added '--exclude storage/cache/*' to the deploy rsync recipe so
rate-limit state is never transferred to the server
- src/cache/: removed (no longer needed)
All RateLimit unit tests pass.
Create the central App helper that eliminates ~170 lines of duplicated
bootstrap/auth/CSRF preamble across 24 page and action handler files.
src/App.php provides:
- boot(): loads Database + ensures CSRF token (public pages)
- adminGuard(): requires AdminAuth login + boot (admin pages)
- verifyCsrf() / rotateCsrf(): centralised CSRF lifecycle
- flash() / consumeFlash(): unified flash messages with legacy key drain
(error, success, admin_error, admin_success, edit_error, edit_success,
form_error all consumed transparently for incremental migration)
- redirect(): flash + Location header + exit in one call
- render(): head → header → content → footer pipeline with auto admin
footer selection
App.php is auto-loaded from config/bootstrap.php so all existing pages
get the class for free without any changes.
templates/partials/flash-messages.php uses App::consumeFlash() to replace
the 5+ copy-pasted flash blocks across admin templates.
All existing tests pass. No existing page files modified — this is a
non-breaking addition that enables incremental controller extraction.
- config.php: getDatabasePath() detects php built-in CLI server
(php_sapi_name() === 'cli-server') and routes to test.db; all
other SAPIs (nginx/fpm) get posterg.db. DB_ENV env-var still
overrides either way.
- migrate.sh: auto-initialise the target DB from storage/schema.sql
when the file is absent or has no tables yet. Existing DBs with
data are left completely untouched (table_count check, no re-run
of schema on populated DB). Idempotent: safe to run repeatedly.
- justfile: serve still calls migrate (which now handles init too),
no DB_ENV prefix needed since sapi detection handles routing.
- Replace three <span class='search-filter-label'> with proper <label for='...'> elements in
search.php filter bar; add id attributes to the corresponding <select> elements so the
label/control association is programmatic (WCAG 1.3.1, 3.3.2).
- Rewrite the rate-limit 429 early-exit in search.php from a bare one-liner echo to a full
HTML document with lang='fr', viewport meta, and inline dark styles matching maintenance.php;
inject the retry countdown into the user-facing message (Template audit F).
- Fix PHP 8.x __wakeup() deprecation in Database.php singleton guard: replace the throw
statement with trigger_error(..., E_USER_ERROR) and add an explicit void return type
(Refactor audit C).
- Replace <div class="tfe-layout"> with <article>, <div class="tfe-left"> with
<header>, <div class="tfe-right"> with <aside> (supplementary media column)
- Fix inverted heading hierarchy: <h1> is now the thesis title (primary topic);
author demoted to <p class="tfe-author"> (metadata, not a heading)
- Replace <div class="tfe-meta-list"> / <div class="tfe-meta-item"> / <span class="label">
/ <span class="value"> with <dl> / <dt> / <dd> (WCAG 1.3.1 info & relationships)
- Replace <div class="tfe-media-block"> with <figure>; <p class="tfe-file-caption">
with <figcaption>; PDF <embed> gets .tfe-pdf-fallback download link (WCAG 4.1.2)
- Move back link to top of left column; extract inline styles to .tfe-back-link,
.tfe-note-value, .tfe-restricted CSS classes
- Fix image alt text: description column used when populated, fallback to
"Title — Author" instead of raw filename (WCAG 1.1.1)
- Add sr-only new-tab warning on baiu_link (WCAG 1.3.1 / 2.4.4)
- Fix PDF embed height: clamp(300px, 80vh, 700px) prevents horizontal overflow
on small screens (WCAG 1.4.10 reflow)
- tfe.css: update all selectors to match new structure; remove inline styles;
unify .tfe-restricted and .tfe-no-files; add .tfe-pdf-fallback, .tfe-back-link
edit.php was a 530-line file mixing form display, POST handling, file
uploads, and reference-data loading. This refactor splits it along the
same action-file pattern already used by formulaire.php, tag.php, and
page.php.
Changes:
- public/admin/actions/edit.php (new): standalone POST handler; auth
guard, CSRF check, transaction, redirect with session flash messages
- public/admin/edit.php: display-only; reads edit_success/edit_error
flash keys from session; form action points to actions/edit.php via
a hidden thesis_id field instead of a query-string self-post
- src/Database.php: four new methods to remove all raw PDO from both
files:
- updateThesis(int, array): void — UPDATE theses core fields
- setThesisAuthors(int, array): void — delete-then-reinsert authors
- getThesisLanguageIds(int): array — SELECT language_id for form
- getThesisFormatIds(int): array — SELECT format_id for form
Create templates/public/head.php accepting $pageTitle and $extraCss (array of
stylesheet hrefs), mirroring the existing templates/admin/head.php pattern.
The partial emits: DOCTYPE, <html lang=fr>, charset/viewport meta, favicon,
modern-normalize, common.css, any extra CSS links, and the dev-only live-reload
script. The live-reload snippet was previously copy-pasted verbatim into all
five public pages.
Updated pages:
- public/index.php ($pageTitle='Posterg', $extraCss=['assets/main.css'])
- public/search.php ($pageTitle='Répertoire – Posterg', search.css)
- public/tfe.php ($pageTitle=thesis title + suffix, tfe.css)
- public/apropos.php ($pageTitle='À Propos – Posterg', apropos.css)
- public/licence.php ($pageTitle=DB title + suffix, apropos.css)
tfe.php: removed redundant htmlspecialchars() call on $pageTitle (the partial
applies it); licence.php: renamed conflicting $page variable to $dbPage to
avoid collision with the shared $pageTitle expected by the partial.
All syntax checks and test suite pass (4/4).
Move the raw identifier-generation query and the INSERT INTO theses /
INSERT INTO thesis_authors statements out of formulaire.php into two new
Database methods:
generateThesisIdentifier(int $year): string
– counts existing theses for the year inside the open transaction so
concurrent workers cannot produce duplicate YYYY-NNN identifiers.
createThesis(array $data): int
– generates the identifier, INSERTs the thesis row, links the author
via thesis_authors (author_order=1), returns the new thesis ID.
getThesisIdentifier(int $id): string
– fetches the stored identifier for a thesis ID; used by formulaire.php
to reconstruct the upload path (storage/theses/YYYY/YYYY-NNN/).
formulaire.php now calls $db->createThesis([…]) + $db->getThesisIdentifier()
and no longer holds any raw PDO queries for the core thesis insert.
The $pdo local variable (previously $db->getPDO()) is removed entirely.
All four test suites (Unit, RateLimit, Integration, Security) pass.
src/config.php: remove the file-existence fallback that silently redirected
all requests to test.db whenever that file was present on disk. getDatabasePath()
now always returns the production DB unless DB_ENV=test is explicitly set.
tests/run-tests.php: putenv('DB_ENV=test') at the top so the suite always
targets test.db regardless of what is set in the shell environment.
tests/Unit/DatabaseTest.php, tests/Integration/SearchTest.php,
tests/Security/SecurityTest.php: same putenv() guard added to each file so
they work correctly when run standalone (e.g. just test-unit).
justfile: all test and DB-development recipes now prefix DB_ENV=test to their
php/sqlite3 commands, making the intent explicit in the recipe itself.
Fixes: a developer who ran the test suite and kept test.db on disk would
silently hit test data when browsing the local site with no DB_ENV set.
The répertoire page was loading the full v_theses_public view
(15 JOINs + 8 GROUP_CONCAT temp B-trees) via getAllPublishedTheses()
just to build the student name → thesis-id map on the index page.
Only two columns (id, authors) were ever consumed by the template.
Add Database::getPublishedAuthors(): array
- Queries thesis_authors JOIN authors directly on the theses base table
- Filters on theses.is_published = 1 using the existing index
- Returns only id + GROUP_CONCAT(authors) — no view expansion
- Results verified identical to the old getAllPublishedTheses() output
Update search.php to call getPublishedAuthors() instead.
Mark getAllPublishedTheses() @deprecated in Database.php.
All tests pass.
- Add getThesisAccessTypeId(int $id): ?int — replaces raw SELECT in tfe.php
- Add getCoverPathsForTheses(array $ids): array — replaces raw SELECT/IN query in index.php
- Add getFileVisibility(string $path): ?int — replaces raw join query in media.php
- Add getThesisBannerPath(int $id): ?string — replaces unparameterised SQL injection in
edit.php (SELECT banner_path FROM theses WHERE id = $thesisId was interpolating $thesisId
directly into the query string; now parameterised via prepared statement)
- Add getThesisRawFields(int $id): ?array — replaces raw SELECT license_id/access_type_id/
context_note in edit.php
- Add getThesisCount(): int — replaces raw SELECT COUNT(*) in system.php
Callers updated: public/tfe.php, public/index.php, public/media.php,
public/admin/edit.php, public/admin/system.php
- Wrap setThesisJury() in a transaction: the method did a DELETE then multiple
INSERTs with no atomicity guarantee. A partial failure (e.g. findOrCreateSupervisor
throwing) would leave the jury table with orphaned rows. The fix uses
pdo->inTransaction() to avoid nesting when called from within an outer transaction,
and performs beginTransaction/commit/rollBack otherwise.
- Replace raw PDO query in admin/thanks.php with db->getThesisFiles(): the file
listing after TFE submission was manually preparing a SELECT on thesis_files
instead of calling the existing Database::getThesisFiles() method. Removes the
getPDO() call entirely from that file.
admin/index.php showed "TFE total / Publiés / En attente" by running
array_filter() over the already-filtered $theses array returned by
getThesesList(). When any search or year filter was active the three
numbers reflected only the matching subset, making the stats misleading
(e.g. searching for a single student would show "1 total, 0 publiés").
Add Database::getThesesStats(): array — a single SQL aggregation query:
SELECT COUNT(*), SUM(is_published), SUM(NOT is_published) FROM theses
This runs against the raw theses table with no filters, so the counters
always display the true whole-database figures regardless of what filter
the admin has active. admin/index.php now calls getThesesStats() and
reads $stats['total'], $stats['published'], $stats['pending'] instead
of the array_filter expressions.
Remove 5 unused ID-lookup helpers (getOrientationId, getAPProgramId,
getFinalityId, getLanguageId, getFormatId) — forms have always passed
FK ids directly from <select> elements; these methods were never called
outside import.php, which now uses inline PDO queries instead.
Collapse 13 alias methods down to the single canonical name for each:
getAllOrientations, getAllAPPrograms, getAllFinalityTypes,
getAllFormatTypes, getAllLanguages, getAllLicenseTypes,
getUsedTags, findOrCreateTag
The short-name variants (getOrientations, getApPrograms, etc.) and
compat aliases (getUsedKeywords, findOrCreateKeyword, getAllLicenseTypes
delegating to getLicenseTypes) are deleted. All call-sites updated:
- public/search.php: getOrientations→getAllOrientations, etc.
- public/admin/import.php: findOrCreateKeyword→findOrCreateTag,
thesis_keywords→thesis_tags, keyword_id→tag_id (fixes stale table
reference from pre-migration-001 that bypassed the M2M rename)
- tests/Unit/DatabaseTest.php: remove alias smoke-test (test 7)
Database.php: 948 → 848 lines (-100).
SQLite performance (Database::__construct):
- PRAGMA journal_mode = WAL: eliminates full-DB read locks on write, safe
for concurrent PHP-FPM workers
- PRAGMA synchronous = NORMAL: durable on commit without full fsync per write
- PRAGMA cache_size = -8000: ~8 MB page cache per connection
Accessibility foundation (WCAG 2.1 AA):
- common.css: add .sr-only utility, .skip-link (hidden until focused),
global :focus-visible (2px purple outline, 2px offset),
prefers-reduced-motion guard; remove bare outline:none from
.site-search__input
- admin.css: same :focus-visible, skip-link, and motion guard scoped to
admin purple; remove outline:none from .admin-input/.admin-select/
.admin-textarea and .admin-filters select (both had :focus border rules
already, so focus is still visually communicated)
- search.css: remove outline:none from .search-filter-select (already has
:focus border-color rule)
- All 5 public pages (index, search, tfe, apropos, licence): add
<a href="#main-content" class="skip-link"> as first child of <body>;
add id="main-content" to <main>
- templates/admin/head.php: same skip link; aria-label="Navigation admin"
on <nav>; id="main-content" on all 10 admin <main> elements
All 4 test suites pass (unit, integration, security, rate-limit).
SecurityTest::Test1 was calling $db->searchTheses($string) with a plain
string, but searchTheses() was refactored to require array $params when
the tag M2M work landed. This caused an immediate PHP fatal TypeError
before any SQL ever ran, killing the entire Security test suite with
exit code 255 and masking all three tests.
Fix: pass each malicious payload via ['query' => $string] which is the
correct API and properly exercises the parameterised query path through
validateSearchParams() + buildSearchConditions(). Added a clarifying
comment explaining why the array form is required.
All 4 test suites now pass:
- Database (Unit): 7/7
- Rate Limit (Unit): 5/5
- Search (Integration): 6/6
- Security: 3/3
- tests/Unit/DatabaseTest.php: tests 5-7 for findOrCreateTag round-trip, getUsedTags column, alias
- tests/Integration/SearchTest.php: tests 4-6 for tag subquery, full-text query, count consistency
- Database: getAllPublishedTheses() bypasses 100-row search cap for student index
- search.php: uses getAllPublishedTheses() for étudiantes column; all tests pass
- Flat purple-gradient nav bar with POSTERG/RÉPERTOIRE/À PROPOS links
- Full-width search bar with icon, bottom-border only, below nav
- Home: white bg, media card grid (thumbnail + author/title label below)
- Répertoire: 4-column index (Années/Catégories/Étudiantes/Mots-clés)
- TFE: 2-column layout (large text left, media right)
- À Propos: 2-column, large monospace text, new apropos.php page
- Admin: dark theme (#1a1a1a), purple gradient nav, bottom-border inputs
- New shared partials: templates/nav.php, templates/search-bar.php
- Rewrote all CSS: common, main, search, tfe, apropos, admin
- Database: extract private buildSearchConditions(array $params): array shared by
searchTheses() and countSearchResults(), eliminating ~80 lines of duplication;
add array type hints to both public methods
- Database: add getThesesList(array $filters) and getAllYears() so admin/index.php
no longer builds raw SQL inline
- admin/index.php: replace inline PDO query block with $db->getThesesList() /
$db->getAllYears(); drop the now-unused $pdo local
- config/bootstrap.php: remove dead include_template() helper and the
vendor/autoload.php Composer stub (no vendor/ directory exists)
- apps/: delete entire directory (leftover artefact, no code references it)
- tests/Integration/SearchTest.php: fix three searchTheses() calls from bare
strings to proper array params to match the method signature (prevented TypeError)
- Reduce all spacing and padding in header for more compact fit
- Fix back button overflow by removing width: 100% and adding overflow handling
- Make filter section more compact with smaller fonts and spacing
- Add main-wrapper div to group main and footer
- Keep rounded corners (40px) on all three sections like main.css
- Footer stays at bottom of main content area
- Fix HTML structure: footer outside main, both inside wrapper
- Transform header into compact search bar with back button
- Move filters panel underneath search bar (collapsible)
- Display results in grid layout matching main.css style
- Add pagination controls in main section
- Show result count in footer
- Prevent overflow with responsive design and proper flex constraints
- Reduce padding and font sizes for denser layout
- Footer now displays all available years horizontally with scroll
- Click on year filters thesis list to that year
- Active year highlighted in footer
- 'Tous' link to reset filter
- Filter info banner shows when year selected with reset button
- Pagination preserves year filter
- Styled with horizontal scroll, smooth scrollbar
- Tests passing ✅
- Created /templates for main site (header.php, footer.php)
- Created /templates/admin for admin section (head.php, footer.php)
- Removed /public/includes and /public/admin/inc
- Updated all references in code and docs
- Tests passing ✅
Cleaner separation: /public only contains web-accessible files (PHP entry points + assets)
